Below you will find articles and research published in various journals and books during 2023 by faculty in the Department of Pathology and Laboratory Medicine. Bolded text infers primary faculty author.
Ahmed Alomari, MD
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1. Couetil J, Liu Z, Huang K, Zhang J, Alomari AK. Predicting melanoma survival and metastasis with interpretable histopathological features of machine learning model. Front Med (Lausanne). 2023 Jan 6;9:1029227 2. Zeches BA, Maher M, Alomari AK. Lymphedematous Fibroepithelial Polyp Without Associated Condom Catheter Use: A Case Report With Review of the Literature. Am J Dermatopathol. 2023 Jul 1;45(7):466-469. 3. Alkashash A, Samiei A, Alomari AK. The new and old in superficial mesenchymal tumors with uncertain origin and/or melanocytic differentiation. Semin Diagn Pathol. 2023 Jul;40(4):258-266. 4. Merkel E, Alomari AK, Somani AK. How We Do It: Ad Hoc Immunohistochemistry for Challenging Mohs Cases. Dermatol Surg. 2023 Sep 26. doi: 10.1097/DSS.0000000000003947. 5. Warren SJ, Alomari AK. Utility of sequencing for ATP6AP1 and ATP6AP2 to distinguish between atypical granular cell tumor with junctional component and melanoma. J Cutan Pathol. 2023 Nov;50(11):1014-1019. 6. De la Sancha C, Kuhar, M, Kraft A, Alomari AK. Primary mucoepidermoid carcinoma of the external auditory canal with a CRTC1::MAML2 fusion: A case report and a review of literature. J Cutan Pathol. 2023 Nov;50(11):947-950. 7. Umphress B, Kuhar M, Kowal R, Alomari AK, Baldridge LA, Ross AJ, Warren SJ. NTRK expression is common in xanthogranuloma and is associated with the solitary variant. J Cutan Pathol. 2023 Nov;50(11):991-1000. 8. Alomari AK, Harms PW, Andea AA, Warren SJ. MAP2K1-mutated melanocytic tumors have reproducible histopathologic features and share similarities with melanocytic tumors with BRAF V600E mutations. J Cutan Pathol. 2023 Dec;50(12):1083-1093. |
Spyridon Bakas, PhD, MSC
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Journal Manuscripts 1. L.Maier-Hein, A.Reinke, P.Godau, M.D.Tizabu, F.Buettner, E.Christodoulou, B.Glocker, F.Isensee, J.Kleesiek, M.Kozubek, M.Reyes, M.A.Riegler, M.Wiesenfarth, A.E.Kavur, C.H.Sudre, M.Baumgartner, M.Eisenmann, D.Heckmann-Nötzel, T.Rädsch, L.Acion, M.Antonelli, T.Arbel, S.Bakas, A.Benis, M.B.Blaschko, M.J.Cardoso, V.Cheplygina, B.Cimini, G.S.Collins, K.Farahani, L.Ferrer, A.Galdran, B.van Ginneken, R.Haase, D.A.Hashimoto, M.M.Hoffman, M.Huisman, P.Jannin, C.E.Kahn, D.Kainmueller, B.Kainz, A.Karargyris, A.Karthikesalingam, F.Kofler, A.Kopp-Schneider, A.Kreshuk, T.Kurc, B.A.Landman, G.Litjens, A.Madani, K.Maier-Hein, A.L.Martel, P.Mattson, E.Meijering, B.Menze, K.G.M.Moons, H.Müller, B.Nichyporuk, F.Nickel, J.Petersen, N.Rajpoot, N.Rieke, J.Saez-Rodriguez, C.I.Sanchez, S.Shetty, M.van Smeden, R.M.Summers, A.A.Taha, A.Tiulpin, S.A.Tsaftaris, B.V.Calster, G.Varoquaux, P.F.Jäger, “Metrics reloaded: Recommendations for image analysis validation”, Nature Methods, [In Press] (arXiv preprint arXiv:2206.01653), 2023 2. A.Reinke, M.D.Tizabi, M.Baumgartner, M.Eisenmann, D.Heckmann-Nötzel, A.E.Kavur, T.Rädsch, C.H.Sudre, L.Acion, M.Antonelli, T.Arbel, S.Bakas, A.Benis, F.Buettner, M.J.Cardoso, V.Cheplygina, J.Chen, E.Christodoulou, B.A.Cimini, K.Farahani, L.Ferrer, A.Galdran, B.v.Ginneken, B.Glocker, P.Godau, D.A.Hashimoto, M.M.Hoffman, M.Huisman, F.Isensee, P.Jannin, C.E.Kahn, D.Kainmueller, B.Kainz, A.Karargyris, J.Kleesiek, F.Kofler, T.Kooi, A.Kopp-Schneider, M.Kozubek, A.Kreshuk, T.Kurc, B.A.Landman, G.Litjens, A.Madani, K.Maier-Hein, A.L.Martel, E.Meijering, B.Menze, K.G.M.Moons, H.Müller, B.Nichyporuk, F.Nickel, J.Petersen, S.M.Rafelski, N.Rajpoot, M.Reyes, M.A.Riegler, N.Rieke, J.Saez-Rodriguez, C.I.Sánchez, S.Shetty, R.M.Summers, A.A.Taha, A.Tiulpin, S.A.Tsaftaris, B.v.Calster, G.Varoquaux, Z.R.Yaniv, P.F.Jäger, L.Maier-Hein, “Understanding metric-related pitfalls in image analysis validation”, Nature Methods, [In Press] (arXiv preprint arXiv:2302.01790), 2023. 3. C.G.Filippi, J.M.Stein, Z.Wang, S.Bakas, Y.Liu, P.D.Chang, Y.Lui, C.Hess, D.P.Barboriak, A.E.Flanders, M.Wintermark, G.Zaharchuk, O.Wu, “Ethical Considerations and Fairness in the Use of Artificial Intelligence for Neuroradiology”, AJNR Am. J. Neuroradiol., 44(11):1242-1248, 2023 4. J.Lost, T.Verma, L.Jekel, M.v.Reppert, N.Tillmanns, S.Merkaj, G.C.Petersen, R.Bahar, A.Gordem, M.A.Haider, H.Subramanian, W.Brim, I.Ikuta, A.Omuro, G.M.Conte, B.V.Marquez-Nostra, A.Avesta, K.Bousabarah, A.Nabavizadeh, A.F.Kazerooni, S.Aneja, S.Bakas, M.Lin, M.Sabel, M.Aboian, “Systematic Literature Review of Machine Learning Algorithms Using Pre-Therapy Radiological Imaging for Glioma Molecular Subtype Prediction”, AJNR Am. J. Neuroradiol., (Online ahead of print), 2023 5. T.M.Malta, T.S.Sabedot, N.S.Morosini, I.Datta, L.Garofano, W.Vallentgoed, F.S.Varn, K.Aldape, F.D’Angelo, S.Bakas, J.S.Barnholtz-Sloan, H.K.Gan, M.Hasanain, A.-C.Hau, K.C.Johnson, M.Khasraw, E.Kocakavuk, M.C.M.Kouwenhoven, S.Migliozzi, S.P.Niclou, J.M.Niers, D.R.Ormond, S.H.Paek, G.Reifenberger, P.A.S.Smitt, M.Smits, L.F.Stead, M.J.van den Bent, E.G.V.Meir, A.Walenkamp, T.Weiss, M.Weller, B.A.Westerman, B.Ylstra, P.Wesseling, A.Lasorella, P.J.French, L.M.Poisson, R.G.W.Verhaak, A.Iavarone, H.Noushmehr, “The epigenetic evolution of gliomas is determined by their IDH1 mutation status and treatment regimen”, Cancer Research [Online ahead of print], 2023. doi: 10.1158/0008-5472.CAN-23-2093. 6. P.Whybra, A.Zwanenburg, V.Andrearczyk, R.Schaer, A.P.Apte, A.Ayotte, B.Baheti, S.Bakas, A.Bettinelli, R.Boellaard, L.Boldrini, I.Buvat, G.J.R.Cook, F.Dietsche, N.Dinapoli, H.S.Gabryś, V.Goh, M.Guckenberger, M.Hatt, M.Hosseinzadeh, A.Iyer, J.Lenkowicz, M.A.L.Loutfi, S.Löck, F.Marturano, O.Morin, C.Nioche, F.Orlhac, S.Pati, A.Rahmim, S.M.Rezaeijo, C.G.Rookyard, M.R.Salmanpour, A.Schindele, I.Shiri, E.Spezi, S.Tanadini-Lang, F.Tixier, T.Upadhaya, V.Valentini, J.J.M.v.Griethuysen, F.Yousefirizi, H.Zaidi, H.Müller, M.Vallières, A.Depeursinge, “The Image Biomarker Standardization Initiative: Standardized convolutional filters for quantitative radiomics”, arXiv preprint arXiv:2006.05470, Radiology (In Press), 2023 7. S.Innani, P.Dutande, U.Baid, V.Pokuri, S.Bakas, S.Talbar, B.Baheti, S.C.Guntuku, “Generative adversarial networks based skin lesion segmentation”, Nature Scientific Reports, 13:13467, 2023. 8. S.M.Rezaeijo, N.Chegeni, F.B.Naeini, D.Makris, S.Bakas, “Within-Modality Synthesis and Novel Radiomic Evaluation of Brain MRI Scans”, Cancers, 15(14), 2023. 9. M.D.Lee, S.H.Patel, S.Mohan, H.Akbari, S.Bakas, M.P.Nasrallah, E.Calabrese, J.Rudie, J.Villanueva-Meyer, P.LaMontagne, D.S.Marcus, R.R.Colen, C.Balana, Y.S.Choi, C.Badve, J.S.Barnholtz-Sloan, A.E.Sloan, T.C.Booth, J.D.Palmer, A.P.Dicker, A.E.Flanders, W.Shi, B.Griffith, L.M.Poisson, A.Chakravarti, A.Mahajan, S.Chang, D.Orringer, C.Davatzikos, R.Jain, “Association of partial T2-FLAIR mismatch sign and isocitrate dehydrogenase mutation in WHO grade 4 gliomas: results from the ReSPOND consortium”, Neuroradiology, 65:1343–1352, 2023. 10. A. Karargyris, R. Umeton, M. Sheller, A. Aristizabal, J. George, A. Wuest, S. Pati, H. Kassem, M. Zenk, U. Baid, P. N. Moorthy, A. Cowdhury, J. Guo, S. Nalawade, J. Rsenthal, D. Kanter, M. Xenochristou, D. Beutel, V. Chung, T. Bergquist , J. Eddy, A. Abid, L. Tunstall, O. Sanseviero, D. Dimitriadis, Y. Qian, X. Xu, Y. Lio, R. S.M. Goh, S. Bala, V. Bittorf, S. R. Puchala, B. Riciuti, S. Samineni, E. Sengupta, A. Chaudhari, C. Coleman, B. Desinghu, G. Diamos, D. Dutta, D. Feddema, G. Fursin, X. Huang, S. Kashyap, N. Lane, I. Mallick, F. Consortium, B. Consortium, A. Consortium, C. Consortium,, P. Mascagni, V. Mehta, C. F. Moraes, V. Natarajan, N. Nikolov, N. Padoy, G. Pekhimenko, V. J. Reddi , G. A. Reina, P. Ribalta, A. Sing, J. J. Thiagarajana, J. Albrecht, T. Wolf, G. Miller, H. Fu, P. Shah, D. Xu, P. Yadav, D. Talby, M. M. Awad, J. P. Howard, M. Rosenthal, L. Marchionni, M. Loda, J. M. Johnson, P. Mattson*, S. Bakas*, “Federated Benchmarking of Medical Artificial Intelligence with MedPerf”, Nature Machine Intelligence, 5:799–810, 2023. 11. S.Pati, S.P.Thakur, I.E.Hamamci, U.Baid, B.Baheti, M.Bhalerao, O.Guley, S.Mouchtaris, D.Lang, S.Thermos, K.Gotkowski, C.Gonzalez, C.Grenko, A.Getka, B.Edwards, M.Sheller, J.Wu, D.Karkada, R.Panchumarthy, V.Ahluwalia, C.Zou, V.Bashyam, Y.Li, B.Haghighi, R.Chitalia, S.Abousamra, T.M.Kurc, A.Gastounioti, S.Er, M.Bergman, J.H.Saltz, Y.Fan, P.Shah, A.Mukhopadhyay, S.A.Tsaftaris, B.Menze, C.Davatzikos, D.Kontos, A.Karargyris, R.Umeton, P.Mattson, S.Bakas, “GaNDLF: The Generally Nuanced Deep Learning Framework for Scalable End-to-End Clinical Workflows”, Nature Communications Engineering, 2(1), 2023. 12. F.Kofler, I.Ezhov, F.Isensee, F.Balsiger, C.Berger, M.Koerner, B.Demiray, J.Rackerseder, J.Paetzold, H.Li, S.Shit, R.McKinley, M.Piraud, S.Bakas, C.Zimmer, N.Navab, J.Kirschke, B.Wiestler, B.H.Menze, “Are we using appropriate segmentation metrics? Identifying correlates of human expert perception for CNN training beyond rolling the DICE coefficient”, Journal of Machine Learning for Biomedical Imaging (MELBA), 2, 2023:002, 2023. 13. B.Kocak*, B.Baessler*, S.Bakas*, R.Cuocolo, A.Fedorov, L.Maier-Hein, N.Mercaldo, H.Muller, F.Orlhac, D.P.Santos, A.Stanzione, L.Ugga, A.Zwanenburg, “CheckList for EvaluAtion of Radiomics research (CLEAR): a step-by-step reporting guideline for authors and reviewers endorsed by ESR and EuSoMII”, Insights Into Imaging, 14(75), 2023. 14. Z.R.Samani, D.Parker, H.Akbari, R.L.Wolf, S.Brem, S.Bakas, R.Verma, “Artificial intelligence-based locoregional markers of brain peritumoral microenvironment”, Nature Scientific Reports, 13(1):963, 2023. 15. R.Dorent, A.Kujawa, M.Ivory, S.Bakas, N.Rieke, S.Joutard, B.Glocker, J.Cardoso, M.Modat, K.Batmanghelich, A.Belkov, M.B.Calisto, J.W.Choi, B.M.Dawant, H.Dong, S.Escalera, Y.Fan, L.Hansen, M.P.Heinrich, S.Joshi, V.Kashtanova, H.G.Kim, S.Kondo, C.N.Kruse, S.K.Lai-Yuen, H.Li, H.Liu, B.Ly, I.Oguz, H.Shin, B.Shirokikh, Z.Su, G.Wang, J.Wu, Y.Xu, K.Yao, L.Zhang, S.Ourselin, J.Shapey, T.Vercauteren, ”CrossMoDA 2021 challenge: Benchmark of Cross-Modality Domain Adaptation techniques for Vestibular Schwnannoma and Cochlea Segmentation”, Medical Image Analysis, 83, 102628, 2023. Full-length peer-reviewed conference papers M.Eisenmann, A.Reinke, V.Weru, M.D.Tizabi, F.Isensee, T.J.Adler, S.Ali, V.Andrearczyk, M.Aubreville, U.Baid, S.Bakas, N.Balu, S.Bano, J.Bernal, S.Bodenstedt, A.Casella, V.Cheplygina, M.Daum, M.de Bruijne , A.Depeursinge, R.Dorent, J.Egger, D.G.Ellis, S.Engelhardt, M.Ganz, N.Ghatwary, G.Girard, P.Godau, A.Gupta, L.Hansen, K.Harada, M.Heinrich, N.Heller, A.Hering, A.Huaulmé, P.Jannin, A.E.Kavur, O.Kodym, M.Kozubek, J.Li, H.Li, J.Ma, C.Martín-Isla, B.Menze, A.Noble, V.Oreiller, N.Padoy, S.Pati, K.Payette, T.Rädsch, J.Rafael-Patiño, V.Singh Bawa, S.Speidel, C.H.Sudre, K.van Wijnen, M.Wagner, D.Wei, A.Yamlahi, M.Yap, C.Yuan, M.Zenk, A.Zia, D.Zimmerer, D.Aydogan, B.Bhattarai, L.Bloch, R.Brüngel, J.Cho, C.Choi, Q.Dou, I.Ezhov, C.M.Friedrich, C.Fuller, R.R.Gaire, A.Galdran, Á.García Faura, M.Grammatikopoulou, S.Hong, M.Jahanifar, I.Jang, A.Kadkhodamohammadi, I.Kang, F.Kofler, S.Kondo, H.Kuijf, M.Li, M.Luu, T.Martinčič, P.Morais, M.A.Naser, B.Oliveira, D.Owen, S.Pang, J.Park, S.Park, S.Płotka, E.Puybareau, N.Rajpoot, K.Ryu, N.Saeed, A.Shephard, P.Shi, D.Štepec, R.Subedi, G.Tochon, H.R.Torres, H.Urien, J.L.Vilaça, K.A.Wahid, H.Wang, J.Wang, L.Wang, X.Wang, B.Wiestler, M.Wodzinski, F.Xia, J.Xie, Z.Xiong, S.Yang, Y.Yang, Z.Zhao, K.Maier-Hein, P.F.Jäger, A.Kopp-Schneider, L.Maier-Hein, “Why is the winner the best?”, IEEE Conference on Computer Vision and Pattern Recognition (CVPR), [In Press], 2023 [arXiv preprint arXiv:2303.17719] Abstracts 1. B.Baheti, S.Innani, G.Mehdiratta, M.P.Nasrallah, S.Bakas, “Interpretable whole slide image prognostic stratification of glioblastoma patients furthering current disease understanding”, Neuro-Oncology, 25(Suppl.2):ii103-ii104, 2023. 2. B.Baheti, S.Innani, M.P.Nasrallah, S.Bakas, “A unsupervised clustering of morphology patterns on whole slide images guide prognostic stratification of glioblastoma patients”, Neuro-Oncology, 25(Suppl.2):ii15, 2023. [Oral Presentation at EANO 2023] 3. S.Pati, U.Baid, B.Edwards, M.Sheller, J.Martin, A.Karargyris, S.Bakas, “The Comprehensive Open Federated Ecosystem (COFE): Enabling impactful healthcare studies”, Pendergrass Symposium (University of Pennsylvania, Philadelphia, PA USA), June 2023. (Plenary session: higher distinction than Summa Cum Laude) 4. B.Baheti, S.Innani, G.Mehdiratta, M.P.Nasrallah, S.Bakas, “Interpretable whole slide image prognostic stratification of glioblastoma patients furthering current clinical knowledge”, 19th European Congress on Digital Pathology (ECDP), 2023. 5. B.Baheti, S.Innani, M.P.Nasrallah, S.Bakas, “Unsupervised clustering of morphology patterns on whole slide images guide prognostic stratification of glioblastoma patients”, 19th European Congress on Digital Pathology (ECDP), 2023. 6. S.Pati, S.Bakas, “Federated Learning and Reproducibility in Healthcare”, Proceedings of the Dagstuhl Seminar Series, 2023 Book Chapter A.Gastounioti, O.H.Maghsoudi, S.Rathore, E.F.Conant, D.Kontos, S.Bakas. Chapter: Computational Applications in Brain and Breast Cancer, “Book: State of the Art in Neural Networks”, Elsevier, 2023. Citable Data Repositories D.Ramakrishnan, L.Jekel, S.Chadha, A.Janas, H.Moy, N.Maleki, M.Sala, M.Kaur, G.C.Petersen, S.Merkaj, M.vonReppert, U.Baid, S.Bakas, C.Kirsch, M.Davis, K.Bousabarah, W.Holler, M.Lin, M.Westerhoff, S.Aneja, F.Memon, M.S.Aboian, “A Large Open Access Dataset of Brain Metastasis 3D Segmentations on MRI with Clinical and Imaging Feature Information (Version 1) [dataset]”. The Cancer Imaging Archive, 2023. DOI: https://doi.org/10.7937/6be1-r748 E-books M.E.Celebi, M.S.Salekin, H.Kim, S.Albarqouni, C.Barata, A.Halpern, P.Tschandl, M.Combalia, Y.Liu, G.Zamzmi, J.Levy, H.Rangwala, A.Reinke , D.Wynn, B.Landman, W.-K.Jeong, Y.Shen, Z.Deng, S.Bakas, X.Li, C.Qin, N.Rieke, H.Roth, D.Xu, “Medical Image Computing and Computer Assisted Intervention – MICCAI 2023 Workshops”, ISIC 2023, Care-AI 2023, MedAGI 2023, DeCaF 2023, Held in Conjunction with MICCAI 2023, Vancouver, BC, Canada, October 8–12, 2023, Proceedings, Lecture Notes in Computer Science book series (LNCS 14393) |
Katrina Collins, MD, MS
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1. Collins K, Acosta AM, Siegmund SE, Cheng L, Hirsch MS, Idrees MT. Genetic Profiling Uncovers Genome-Wide Loss of Heterozygosity and Provides Insight into Mechanisms of Sarcomatoid Transformation in Chromophobe Renal Cell Carcinoma. Mod Pathol. 2023 Dec 1;37(2):100396. doi: 10.1016/j.modpat.2023.100396. Epub ahead of print. PMID: 38043790. |
Laura Cracco, PhD, MS
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1. Cracco L, Cali I, Cohen ML, Aslam R, Notari S, Kong Q, Newell KL, Ghetti B, Appleby BS, Gambetti P. Efficient transmission of human prion diseases to a glycan-free prion protein-expressing host. Brain. 2023 Nov 24:awad399. doi: 10.1093/brain/awad399. Epub ahead of print. PMID: 38000783. 2. Fontana E, Bongianni M, Benussi A, Bronzato E, Scialo C, Sacchetto L, Cagnin A, Castriciano S, Buratti E, Gardoni F, Italia M, Schreiber A, Ferracin C, Fiorini M, Newell KL, Cracco L, Garringer HJ, Cecchini MP, Polymenidou M, Padovani A, Monaco S, Legname G, Ghetti B, Borroni B, Zanusso G. Detection of TDP-43 seeding activity in the olfactory mucosa from patients with frontotemporal dementia. Alzheimers Dement. 2023 Oct 31. doi: 10.1002/alz.13541. Epub ahead of print. PMID: 37908186. 3. Cracco L, Puoti G, Cornacchia A, Glisic K, Lee SK, Wang Z, Cohen ML, Appleby BS, Cali I. Novel histotypes of sporadic Creutzfeldt-Jakob disease linked to 129MV genotype. Acta Neuropathol Commun. 2023 Aug 31;11(1):141. doi: 10.1186/s40478-023-01631-9. PMID: 37653534; PMCID: PMC10469800. 4. Cracco L, Doud EH, Hallinan GI, Garringer HJ, Jacobsen MH, Richardson RM, Buratti E, Vidal R, Ghetti B, Newell KL. Distinguishing post-translational modifications in dominantly inherited frontotemporal dementias: FTLD-TDP Type A (GRN) vs Type B (C9orf72). Neuropathol Appl Neurobiol. 2022 Oct;48(6):e12836. doi: 10.1111/nan.12836. Epub 2022 Jul 28. PMID: 35836354; PMCID: PMC9452479. 5. Hallinan GI, Ozcan KA, Hoq MR, Cracco L, Vago FS, Bharath SR, Li D, Jacobsen M, Doud EH, Mosley AL, Fernandez A, Garringer HJ, Jiang W, Ghetti B, Vidal R. Cryo-EM structures of prion protein filaments from Gerstmann-Sträussler-Scheinker disease. Acta Neuropathol. 2022 Sep;144(3):509-520. doi: 10.1007/s00401-022-02461-0. Epub 2022 Jul 12. PMID: 35819518; PMCID: PMC9381446. |
Rejwi Dahal, PhD, DABCC
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Michael F. Wanglerb, Barbara Lesko, Rejwi Dahal, Sharayu Jangamb, Pradnya Bhadaneb,, Theo Wilsona, Molly McPherona, and Marcus J. Miller. (2023). Dicarboxylic acylcarnitine biomarkers in peroxisome biogenesis disorders. DOI: 10.1016/j.ymgme.2023.107680 Park, J. N., Urquhart, G., Morris, M., Dahal, R., Rouhani, S., & Sherman, S. G. (2022). Discordance Between Self-reported and Biologically Tested Exposure to Fentanyl Among People at Risk of Opioid Overdose. Journal of addiction medicine. doi: 10.1097/ADM.0000000000000969 |
Jessica Davis, MD
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1. Collins K, Ulbright TM, Davis JL. Anterior mediastinal neuroblastoma in an adult: an additional case of a rare tumor in an unusual location with review of the literature. Diagn Pathol. 2023 Nov 29;18(1):127. 2. Johnson A, Johnson T ‡, Winsnes K, Davis JL. NUT Carcinoma: A Rare Presentation of a Chest Mass with Hypercalcemia in a Pediatric Patient. Human Pathology Reports. 2023; 31: 300689. https://doi.org/10.1016/j.hpr.2022.300689 3. Ulici V, Hornick JL, Davis JL, Mehrota S, Meis JM, Halling KC, Fletcher C, Kao E, Folpe A. “E-MGNET": Extra-Enteric Malignant Gastrointestinal Neuroectodermal Tumor- A Clinicopathological and Molecular Genetic Study of 11 Cases. Modern Path. 2023; 36(7):100160. PMID: 36934861 4. Weiss A, Chen YL, Scharschmidt T, Chi YY, Tian J, Black JO, Davis JL, Fanberg-Smith J, Zanbrano E, Hawkins DD, Kayton M, Million L, Okuno SH, Ostrenga AR, Randall L, Choy E, Sorger J, Spunt SL, Terezakis SA, Wang. Outcomes of children and adults with large unresected intermediate-grade or high-grade soft tissue sarcoma receiving preoperative chemoradiation with or without pazopanib (ARST1321): a multicentre, randomised, open-label, phase 2 trial. J Clin Oncol. 2023; 41:4842-4848. PMID: 37523624. 5. Xi D, Davis JL, Haker M, Lin H. Resolution of anastomotic ulceration and profound bleeding by endoscopic cauterization and oral budesonide. JPGN Reports. 2023. 4(3): p e328. 6. Warmke LM, Al-Ibrahemmi A, Wang L, Parham D, Rudzinski E, Davis JL. FGFR1 gene fusions in a subset of pediatric mesenchymal tumors: Expanding the genetic spectrum of tumors sharing histologic overlap with infantile fibrosarcoma and “NTRK-rearranged” spindle cell tumors. Genes, Chromosomes, and Cancer. 2023;62:641-647. PMID: 37265193. 7. Warmke LM, Collier C, Davis JL. NR1D1::MAML1 epithelioid and spindle cell sarcoma mimicking pseudomyogenic hemangioendothelioma in core biopsy: A case report and review of the literature. Genes, Chromosomes, and Cancer. 2023. Epub. PMID: 37326138 8. Smith BF‡, Doung YC, Beckett B, Corless CL, Davis LE, Davis JL. Intraosseous Spindle Cell Rhabdomyosarcoma with MEIS1::NCOA2 Fusion – Case Report with Substantial Clinical Follow-up and Review of the Literature. Cancer Investigations. 2023; 41: 704-712. PMID: 37668330. 9. Gestrich C ‡, Davis JL, Biederman L, John I, Alaggio R, Arnold MA, Shenoy A, Tchakarov A, Al-Ibraheemi A. ALK-rearranged Epithelioid Mesenchymal Neoplasm: Expanding the Spectrum of Tyrosine Kinase Altered Mesenchymal Tumors. Modern Pathol. 2023; 36:100334. PMID: 37726067. 10. Warmke LM, Mustafa A, Zou YS, Davis JL, Ulbright TM, Segura SE. Myxoid epithelioid smooth muscle tumor of the vulva: A distinct entity with MEF2D::NCOA2 gene fusion. Genes, Chromosomes, and Cancer. 2023. Epub. PMID: 37879842. 11. Aru M‡, Davis JL, Mills MK, Stacy GS, Grossmann AH, Nomura E, McCallum R, Hansford BG. Beyond schwannomas and neurofibromas: a radiological and histopathological review of lesser-known lesions that arise in association with peripheral nerves. Skeletal Radiology. 2023; 52:649-669. PMID: 36280619. 12. Black JO, Al-Ibraheemi A, Arnold M, Coffin C, Davis JL, Parham D, Rudzinski E, Surrey L, Tan S, Spunt S.* The Pathologic Diagnosis of Pediatric Soft Tissue Tumors in the Era of Molecular Medicine: The Sarcoma Pediatric Pathology Research InTErest Group (SPPRITEs) Perspective. Arch Pathol Lab Med. 2023. Epub. PMID: 37196343 *All authors in alphabetic order 13. Reed DR, Grohar PJ, Rubin E, Binitie O, Krailo M, Davis JL, Dubois S, Janeway K. Children’s Oncology Group’s 2023 Blueprint for Research: Bone Tumors. Pediatr Blood Cancer. 2023 Sep;70 Suppl 6:e30583. PMID: 37501549. 14. Dehner C, Rudzinski ER, Davis JL. Updates on Classification and the Necessity of Molecular Testing Beyond Immunohistochemistry. Human Pathology. 2023. Epub. PMID: 38135061. |
Thomas Davis, MS, MD, PhD
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Stephen P Bergin, Roy F Chemaly, Sanjeet S Dadwal, Joshua A Hill, Yeon Joo Lee, Ghady Haidar, Alfred Luk, Alexander Drelick, Peter V Chin-Hong, Esther Benamu, Fareed Khawaja, Deepa Nanayakkara, Genovefa A Papanicolaou, Catherine Butkus Small, Monica Fung, Michelle A Barron, Thomas Davis, Micah T McClain, Eileen K Maziarz, Deng B Madut, Armando D Bedoya, Daniel L Gilstrap, Jamie L Todd, Christina E Barkauskas, Robert Bigelow, Jeffrey D Leimberger, Ephraim L Tsalik, Olivia Wolf, Mona Mughar, Desiree Hollemon, Radha Duttagupta, Daniel S Lupu, Sivan Bercovici, Bradley A Perkins, Timothy A Blauwkamp, Vance G Fowler, Jr, Thomas L Holland. Plasma Microbial Cell-Free DNA Sequencing in Immunocompromised Patients With Pneumonia: A Prospective Observational Study. Clinical Infectious Diseases, ciad599, https://doi.org/10.1093/cid/ciad599 |
Carina Dehner, MD, PhD
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1. Koshyk O, Dehner CA, van den Hout MFCM, Bempt IV, Sciot R, Huang HY, Agaimy A, Din NU, Klubíčková N, Mosaieby E, Skálová A, Michalová K, Schöffski P, Oliveira AM, Halling KC, Gupta S, Gross JM, Nin JWM, Michal M, Folpe AL, Kosemehmetoglu K, Torres-Mora J, Michal M. EWSR1::POU2AF3(COLCA2) Sarcoma: An Aggressive, Polyphenotypic Sarcoma With a Head and Neck Predilection. Mod Pathol. 2023 Dec;36(12):100337. doi: 10.1016/j.modpat.2023.100337. Epub 2023 Sep 22. PMID: 37742928. 2. Rogers LC, Kremer JC, Brashears CB, Lin Z, Hu Z, Bastos ACS, Baker A, Fettig N, Zhou D, Shoghi KI, Dehner CA, Chrisinger JSA, Bomalaski JS, Garcia BA, Oyama T, White EP, Van Tine BA. Discovery and Targeting of a Noncanonical Mechanism of Sarcoma Resistance to ADI-PEG20 Mediated by the Microenvironment. Clin Cancer Res. 2023 Aug 15;29(16):3189-3202. doi: 10.1158/1078-0432.CCR-22-2642. PMID: 37339179; PMCID: PMC10425734. 3. Larsson AT, Bhatia H, Calizo A, Pollard K, Zhang X, Conniff E, Tibbitts JF, Rono E, Cummins K, Osum SH, Williams KB, Crampton AL, Jubenville T, Schefer D, Yang K, Lyu Y, Pino JC, Bade J, Gross JM, Lisok A, Dehner CA, Chrisinger JSA, He K, Gosline SJC, Pratilas CA, Largaespada DA, Wood DK, Hirbe AC. Ex vivo to in vivo model of malignant peripheral nerve sheath tumors for precision oncology. Neuro Oncol. 2023 Nov 2;25(11):2044-2057. doi: 10.1093/neuonc/noad097. PMID: 37246765; PMCID: PMC10628938. 4. Dehner CA, Broski SM, Meis JM, Murugan P, Chrisinger JSA, Sosa C, Petersen M, Halling KC, Gupta S, Folpe AL. Fusion-driven Spindle Cell Rhabdomyosarcomas of Bone and Soft Tissue: A Clinicopathologic and Molecular Genetic Study of 25 Cases. Mod Pathol. 2023 Oct;36(10):100271. doi: 10.1016/j.modpat.2023.100271. Epub 2023 Jul 7. PMID: 37422156. 5. Dehner CA, Rudzinski ER, Davis JL. Rhabdomyosarcoma: Updates on classification and the necessity of molecular testing beyond immunohistochemistry. Hum Pathol. 2023 Dec 21:S0046-8177(23)00251-4. doi: 10.1016/j.humpath.2023.12.004. Epub ahead of print. PMID: 38135061. 6. Dehner CA, Schroeder MC, Lyu Y, Bell R, Borcherding DC, Moon T, Hirbe A, Chrisinger JSA. Molecular Characterization of Multifocal Granular Cell Tumors. Am J Surg Pathol. 2023 Mar 1;47(3):326-332. doi: 10.1097/PAS.0000000000001992. Epub 2022 Nov 14. PMID: 36534754. 7. Dehner CA, Torres-Mora J, Erickson LA. Mesenchymal Neoplasm With ACTB-GLI1 Fusion in an Individual With Neurofibromatosis Type 1. Mayo Clin Proc. 2023 Jan;98(1):206-207. doi: 10.1016/j.mayocp.2022.11.008. PMID: 36603952. 8. Gangahar CN, Dehner CA, Wang DP, Amini B, Hillen T, O'Conor C, Jennings SN, Byrnes K, Montgomery EA, Czerniak BA, Bridge JA, Schroeder MC, Jennings JW, Wang WL, Chrisinger JSA. Intraosseous hibernoma: clinicopathologic and imaging analysis of 18 cases. Histopathology. 2023 Jul;83(1):40-48. doi: 10.1111/his.14928. Epub 2023 Apr 26. PMID: 37099409. 9. Dehner CA, Torres-Mora J, Gupta S, Kipp BR, Halling KC, Chen S, Warmke LM, Michal M, Alani A, Yu W, Kovacs K, Obeidin F, Iwenofu OH, Satturwar S, Meis JM, Folpe AL. Sarcomas Harboring EWSR1::PATZ1 Fusions: A Clinicopathologic Study of 17 Cases. Mod Pathol. 2023 Dec 1;37(2):100400. doi: 10.1016/j.modpat.2023.100400. Epub ahead of print. PMID: 38043789. 10. Dehner CA, Bell RC, Cao Y, He K, Chrisinger JSA, Armstrong AE, Yohe M, Shern J, Hirbe AC. Loss of Chromosome 3q Is a Prognostic Marker in Fusion-Negative Rhabdomyosarcoma. JCO Precis Oncol. 2023 Sep;7:e2300037. doi: 10.1200/PO.23.00037. PMID: 37738543. 11. Dehner CA, Moon T, Lyu Y, Zhang X, Zhou Z, Yang K, Chrisinger JSA, Griffin A, Wunder J, Dickson BC, Hirbe AC. Mutations involving TGFB and MAPK may be associated with malignancy in granular cell tumors. Genes Chromosomes Cancer. 2023 May;62(5):301-307. doi: 10.1002/gcc.23123. Epub 2023 Feb 3. PMID: 36680529. 12. Dehner CA, Geiersbach K, Rowsey R, Murugan P, Broski SM, Meis JM, Rosenberg AE, Folpe AL. Rhabdomyosarcoma Arising in Inflammatory Rhabdomyoblastic Tumor: A Genetically Distinctive Subtype of Rhabdomyosarcoma. Mod Pathol. 2023 Jun;36(6):100131. doi: 10.1016/j.modpat.2023.100131. Epub 2023 Feb 12. PMID: 36966552. 13. Dehner CA, Johnson EF, Peters MS, Guo RR. Primary melanoma of the nipple: Report of 10 cases including coexistence with Paget's disease. Pathol Res Pract. 2023 Dec 22;253:155058. doi: 10.1016/j.prp.2023.155058. Epub ahead of print. PMID: 38181578. 14. Dehner CA, Lo YC, Chopra S, Demicco EG, He K, Hirbe AC, Folpe AL, Chrisinger JSA. CSF1 expression in xanthogranulomatous epithelial tumor/keratin-positive giant cell-rich tumor. Hum Pathol. 2024 Jan;143:1-4. doi: 10.1016/j.humpath.2023.11.006. Epub 2023 Nov 20. PMID: 37993023. |
Hong Du, PhD
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Publications: Zhao, T., Liu, S., Hanna, N.H., Jalal, S., Ding, X., Wan, J., Yan, C. and Du, H. (2023) LAL Deficiency Induced Myeloid-Derived Suppressor Cells as Targets and Biomarkers for Lung Cancer. Journal for ImmunoTherapy of Cancer 2023;0:e006272. doi:10.1136/jitc-2022-006272. Book Chapter: Zhao, T., Du, H. and Yan, C. (2023) Characterization of lysosomal acid lipase in Ly6G+ and CD11c+ myeloid-derived suppressor cells. “Methods in Cell Biology” Elsevier, DOI: 10.1016/bs.mcb.2023.05.011 |
Christopher Emery, MD
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1. Blanchard L. S., Van Belkum, A., Dechaume D., Armstrong T., Emery C. L., Ying Y.X., Kresten M., Pompilio M., Halimi D., Zambardi G. Multicenter clinical evaluation of ETEST® plazomycin (PLZ) for susceptibility testing of Enterobacterales. Journal of Clinical Microbiology. January 19th, 2022. https://pubmed.ncbi.nlm.nih.gov/34757833/ 2. Padanilam M. S., Qasim M. Q., Emery C. L. Moraxella canis induced sepsis from dog’s lick. IDCases. January 10th, 2022. https://pubmed.ncbi.nlm.nih.gov/35079573/ 3. Gavina K., Franco L. C., Robinson C. M., Hymas W., Guang-Sheng L., Sinclair W., Hall T., Carquist J., Lavik J. P., Emery C. L., Heaton P. R., Hillyard D., Lopranski B. K., Relich R. F. Standardization of SARS-CoV-2 cycle threshold values – A multisite investigation evaluating viral quantitation across multiple commercial COVID-19 detection platforms. Microbiology Specturm. January, 18th, 2023. https://pubmed.ncbi.nlm.nih.gov/36651781/ 4. Blanchard L. S., Armstrong T., Emery C. L., Ying Y. X., Kresken M., Zambardi G. Multicenter clinical evaluation of ETEST® eravacycline (ERV) for susceptibility testing of Enterobacteriaceae and enterococci. Journal of Clinical Microbiology. March 6th, 2023. https://pubmed.ncbi.nlm.nih.gov/36877080/ 5. Gavina K. C., Whitacre B. E., Meyer T., Van Benten K., Glazier M., Emery C. L., Lavik J. P., Relich R. F. Suspicious Gram-negative coccobacilli - Francisella tularensis non-subsp. tularensis isolated from an immunocompromised patient with blastomycosis. Journal of Clinical Microbiology. v.61 (6). June, 2023. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10281130/ |
Michael Feldman, MD, PhD
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1. Jose L Agraz, Caleb M Grenko, Andrew A Chen, Angela N Viaene, MacLean D Nasrallah, Sarthak Pati, Tahsin Kurc, Joel Saltz, Michael D Feldman, Hamed Akbari, Parth Sharma, Russell T Shinohara, Spyridon Bakas: Robust Image Population Based Stain Color Normalization: How Many Reference Slides Are Enough? IEEE Open J Eng Med Biol 5(3): 218-226, Jan 2023. PMID: 36860498
2. Gary Tozbikian, Savitri Krishnamurthy, Marilyn M Bui, Michael Feldman, David G Hicks, Shabnam Jaffer, Thaer Khoury, Shi Wei, Hannah Wen, Paula Pohlmann: Emerging Landscape of Targeted Therapy of Breast Cancers With Low HER2 Protein Expression. Arch Pathol Lab Med Apr 2023. PMID: 37014972 3. Yuli Chen , Haojia Li, Andrew Janowczyk, Paula Toro, Germán Corredor, Jon Whitney, Cheng Lu, Can F Koyuncu, Mojgan Mokhtari, Christina Buzzy, Shridar Ganesan, Michael D Feldman, Pingfu Fu, Haley Corbin, Aparna Harbhajanka, Hannah Gilmore, Lori J Goldstein, Nancy E Davidson, Sangeeta Desai, Vani Parmar, Anant Madabhushi: Computational pathology improves risk stratification of a multi-gene assay for early stage ER+ breast cancer. NPJ Breast Cancer 17(9): 40, May 2023. PMID: 37198173
4. Andrea C Wong, Ashwarya S Devason, Iboro C Umana, Timothy O Cox, Lenka Dohnalová , Lev Litichevskiy, Jonathan Perla, Patrick Lundgren 2, Zienab Etwebi, Luke T Izzo, Jihee Kim, Monika Tetlak, Hélène C Descamps, Simone L Park, Stephen Wisser, Aaron D McKnight, Ryan D Pardy, Junwon Kim, Niklas Blank, Shaan Patel, Katharina Thum, Sydney Mason, Jean-Christophe Beltra, Michaël F Michieletto, Shin Foong Ngiow, Brittany M Miller, Megan J Liou, Bhoomi Madhu, Oxana Dmitrieva-Posocco, Alex S Huber, Peter Hewins, Christopher Petucci, Candice P Chu, Gwen Baraniecki-Zwil, Leila B Giron, Amy E Baxter, Allison R Greenplate, Charlotte Kearns, Kathleen Montone, Leslie A Litzky, Michael Feldman, Jorge Henao-Mejia, Boris Striepen, Holly Ramage, Kellie A Jurado, Kathryn E Wellen, Una O'Doherty, Mohamed Abdel-Mohsen, Alan L Landay, Ali Keshavarzian, Timothy J Henrich, Steven G Deeks, Michael J Peluso, Nuala J Meyer, E John Wherry, Benjamin A Abramoff, Sara Cherry, Christoph A Thaiss, Maayan Levy: Serotonin reduction in post-acute sequelae of viral infection. Cell 186(22): 4851-67, Oct 2023. 5. Dylane Winelan, Anh N Le, Ryan Hausler, Gregory Kelly, Emanuel Barrett, Heena Desai, Bradley Wubbenhorst, John Pluta, Paul Bastian, Heather Symecko, Kurt D'Andrea, Abigail Doucette, Peter Gabriel, Kim A Reiss, Anupma Nayak, Michael Feldman, Susan M Domchek, Katherine L Nathanson, Kara N Maxwell: Biallelic BRCA Loss and Homologous Recombination Deficiency in Nonbreast/Ovarian Tumors in Germline BRCA1/2 Carriers. JCO Precis Oncol 7, Oct 2023. PMID: 37535879
6. Charles C L Tong, Xiang Lin, Tyler Seckar, Mateusz Koptyra, Michael A Kohanski, Noam A Cohen, David W Kennedy, Nithin D Adappa, Peter Papagiannopoulos, Edward C Kuan, Esther Baranov, Jalal B Jalaly, Michael D Feldman, Phillip B Storm, Adam C Resnick, James N Palmer, Zhi Wei, Erle S Robertson: A metagenomic analysis of the virome of inverted papilloma and squamous cell carcinoma. Int Forumm Allergy Rhinol 13(11): 2055-62, Nov 2023. PMID: 37189250
7. Qian Zhang, Johnvesly Basappa, Hong Y Wang, Selene Nunez-Cruz, Cosimo Lobello, Shengchun Wang, Xiaobin Liu, Seble Chekol, Lili Guo, Amy Ziober, Reza Nejati, Alex Shestov, Michael Feldman, Jerry D Glickson, Suzanne D Turner, Ian A Blair, Chi Van Dang, Mariusz A Wasik: Chimeric kinase ALK induces expression of NAMPT and selectively depends on this metabolic enzyme to sustain its own oncogenic function. Leukemia 37(12): 2436-47, Dec 2023. PMID: 37773266
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Holly Garringer, PhD
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1. *Yang Y, Garringer HJ, Shi Y, Lövestam S, Peak-Chew S, Zhang X, Kotecha A, Bacioglu M, Koto A, Takao M, Spillantini MG, Ghetti B, Vidal R, Murzin AG, Scheres SHW, & Goedert M. (2023). New SNCA mutation and structures of α-synuclein filaments from juvenile-onset synucleinopathy. Acta neuropathologica, 145(5), 561–572. |
Ivan Gonzalez, MD
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1. González IA, Jain D. Diagnosis and Classification of Vascular Liver Disorders. Diagnostic Histopathology 2023;29(1):36-51. 2. González IA, Wang D, Pacheco MC, Zhang X, Russo P. Focal Nodular Hyperplasia in the Pediatric Population: a multicenter experience. Pediatric and Developmental Pathology 2023 Apr 21. PMID: 37082924 3. González IA, Torbenson M, Sharifai N, Byrnes K, Chatterjee D, Kakar S, Yeh MM, Wu TT, Zhang X, Jain D. Clinicopathologic characterization of hepatocellular adenomas in men: a multicenter experience. Human Pathology 2023;138:24-33. PMID: 37245629 [Cover of the August 2023 issue] 4. González IA, Luo W, Zhang X. Solid-Tubulocystic Carcinoma: A New Variant of Intrahepatic Cholangiocarcinoma. World Journal of Hepatology 2023;15(7):897-9203. PMID: 37547028. 5. González IA, Linn R. Clinicopathologic characterization of gallbladder graft-versus-host disease in the pediatric population. Human Pathology 2023;139:9-16. PMID: 37364823 6. González IA, Conrad M, Weinbrom S, Patel T, Kelsen JR, Russo P. Clinicopathologic Characterization of Lymphocytic Colitis in the Pediatric Population. Pediatric and Developmental Pathology 2023 Dec 31. PMID: 38160439 [Epub Ahead of Print] |
Tieying Hou, MB, PhD, MS
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1. Hou T, Yang Z, Zhang Q, Zhang X, Liao X, Lin J. Histology shift in esophageal cancer between biopsies and resections after neoadjuvant therapy: a pilot study. Int J Surg Pathol, 2023 Oct Online ahead of print. PMID: 37899731 2. Tang Z, Li Z, Hou T, Zhang T, Yang B, Su J, Song Q. SiGra: single-cell spatial elucidation through an image-augmented graph transformer. Nat Commun. 2023 Sep 12;14(1):5618. 3. Hou T, Abu-Salah A, Cummings OW, Halum S, Mesa H, Zhang D. Amyloid Deposition in the Upper Aerodigestive Tract, A Single Institute Experience. Ear Nose Throat J 2023 Jul 28: Online ahead of print. PMID: 37515371 4. Surucu A, Hou T, Kuhar M, Durm G, Mesa H. Comparison of PD-L1 IHC 22C3 PharmDx Combined Positive Score (CPS) in Primary Versus Metastatic Nodal Squamous Cell Carcinomas of the Head and Neck: Is There a Significant Difference? Appl Immunohistochem Mol Morphol. 2023 Sep 1;31(8):550-554. PMID: 37358840 5. Zou S, McDow A D, Saeed Z, Hou T. Multifocal C-cell hyperplasia and marked hypercalcitoninemia in a diabetic patient treated with glucagon-like peptide-1 agonist with concurrent multinodular goiter and hyperparathyroidism. Cureus 2023 Jan. 15(1): e33384. PMID: 36751230 6. Hou T, Levy DR, Ulbright TM. Morphologic changes in the thymus following chemotherapy for anterior mediastinal germ cell tumors. Arch Pathol Lab Med 2023. Jun 1;147(6):676-683. PMID: 36136298 |
Matthew Kuhar, MD
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1. Umphress B, Kuhar M, Kowal R, Alomari AK, Baldridge LA, Ross AJ, Warren SJ. NTRK expression is common in xanthogranuloma and is associated with the solitary variant. J Cutan Pathol. 2023 Nov;50(11):991-1000. PMID: 37580954. 2. De la Sancha C, Kuhar M, Kraft A, Alomari AK. Primary mucoepidermoid carcinoma of the external auditory canal with a CRTC1::MAML2 fusion: A case report and a review of literature. J Cutan Pathol. 2023 Nov;50(11):947-950. PMID: 37394842. 3. Doan KD, Akinsanya A, Kuhar M, Mesa H. Fatal eosinophilic myocarditis and submassive hepatic necrosis in lamotrigine induced DRESS syndrome. Allergy Asthma Clin Immunol. 2023 Oct 25;19(1):92. PMID: 37880699. 4. Surucu A, Hou T, Kuhar M, Durm G, Mesa H. Comparison of PD-L1 IHC 22C3 PharmDx Combined Positive Score (CPS) in Primary Versus Metastatic Nodal Squamous Cell Carcinomas of the Head and Neck: Is There a Significant Difference? Appl Immunohistochem Mol Morphol. 2023 Sep 1;31(8):550-554. PMID: 37358840. |
Charalampos Lyssikatos, MD
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1. Charalampos Lyssikatos, Zhiying Wan, Ziyue Liu, Stuart Warden, Marco Brotto, Lynda Bonewald. L-β-aminoisobutyric acid, L-BAIBA, a marker of bone mineral density and body mass index, and D-BAIBA of physical performance and age. Sci Rep. 2023 Oct 11;13(1):17212. doi: 10.1038/s41598-023-44249-6. PMID: 37821627 2. Charalampos Lyssikatos, Zhiying Wang, Ziyue Liu, Stuart Warden, Lynda Bonewald, Marco Brotto. γ-Aminobutyric acids (GABA) and serum GABA/AABA (G/A) ratio as potential biomarkers of physical performance and aging. Sci Rep. 2023 Oct 10;13(1):17083. doi: 10.1038/s41598-023-41628-x. PMID: 37816783 3. Stuart J. Warden, Andrew Dick, Janet E. Simon, Todd M. Manini, David W. Russ, Charalampos Lyssikatos, Leatha A. Clark, Thomas N. Hangartner, Brian C. Clark. Fracture Discrimination Capability of Ulnar Flexural Rigidity Measured via Dynamic Vibration Analysis: Study Protocol for The Stronger Study Manuscript accepted for publication at the Journal of Bone and Mineral Research (JBMR Plus) |
Hector Mesa, PhD, MD
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1. Lee C, Hayat U, Song K, Gravely AA, Mesa H, Peltola J, Iwamoto C, Manivel C, Bilal M, Shaheen N, Shaukat A, Hanson BJ. A Consensus Diagnosis Utilizing Surface KI-67 Expression as an Ancillary Marker in Low-Grade Dysplasia Helps Identify Patients at High Risk of Progression to High-Grade Dysplasia and Esophaegal Adenocarcinoma. Dis Esophagus. 2023;36(3): doac065. doi: 10.1093/dote/doac065. Erratum in: Dis Esophagus. 2023 Jul 27;36(8): PMID: 36190180. 2. Gerard A, Mesa H, Danziger-Isakov L, Barros KL, Alali M. Successful treatment of malakoplakia of the liver and skin in a pediatric liver transplant patient. Pediatric Transplantation. 2023;00: e14492. doi:10.1111/petr.14492. PMID: 36860187 3. Abu-Salah A, Brocken E, Mesa H, Collins K. Jejunum Intussusception Secondary to a Large Inflammatory Fibroid Polyp: A Case Report and Discussion of Differential Diagnosis. Case Rep Pathol. 2023 Apr 13; 2023: 9417141. doi: 10.1155/2023/9417141. PMID: 37091748. 4. Collins K, Puello Yocum B, Mesa H, Cramer H, Saeed O. Comparison of Endoscopic Ultrasound-Guided Fine Needle Aspiration Cytology vs. Endoscopic Biopsy for the diagnosis of Upper and Lower Subepithelial Gastrointestinal Lesions: A 10- Year Retrospective Single Institution Analysis. Diag Cytopath. 2023 DOI: 10.1002/dc.25136. PMID: 37021663 5. Khan J, Asad U, Khan Yasinzai AQ, Mastos S, Khan M, Heneidi S, Mesa H, Chauhan A, Del Rivero J, Abdel Karim N. Pulmonary Large Cell Neuroendocrine Carcinoma (LCNEC): A Population-based study addressing recent molecular-genetic advances and emerging therapeutic approaches. Clin Exp Med. 2023. doi: 10.1007/s10238-023-01071-8. Epub ahead of print. PMID: 37060529. 6. Khan J, Ullah A, Goodbee M, Lee MT, Khan Yasinzai AQ, Lewis Jr JS, Mesa H. Acinic Cell Carcinoma in the 21st Century: A Population-Based Study from the SEER Database and Review of Recent Molecular Genetic Advances. Cancers (Basel). 2023 Jun 27;15(13):3373. doi: 10.3390/cancers15133373. PMID: 37444484 7. Surucu A, Hou T, Kuhar M, Durm G, Mesa H. Comparison of PD-L1 IHC 22C3 pharmDx Combined Positive Score (CPS) in primary vs. metastatic nodal squamous cell carcinomas of the Head and Neck; Is there a significant difference? Appl. Immunohistochem. Mol. Morphol. 2023; 31:550-554. PMID: 37358840. 8. Nova-Camacho LM, Acosta AM, Trpkov K, Sangoi AR, Pierre A, Chou A, Yilmaz A, Morini A, Rodrigues A, Fletcher CDM, Perez-Montiel D, Maclean F, Contreras F, Queipo FJ, Muñiz Unamunzaga G, Mesa H, et al. Metastatic solid tumors to the testis: a clinicopathologic evaluation of 157 cases from an international collaboration. Hum Pathol. 2023 Jun 16: S0046-8177(23)00135-1. doi: 10.1016/j.humpath.2023.06.002. Epub ahead of print. PMID: 37331529. 9. Polster N, Puello Yocum B, Lavik J-P, Mesa H. Painful granulomatous Hashimoto thyroiditis uncovered systemic histoplasmosis. Int J Surg Path 2023. Int J Surg Pathol. 2023. doi: 10.1177/10668969231186928. PMID: 374612 10. Hou T, Abu-Salah A, Cummings OW, Halum S, Mesa H, Zhang D. Amyloid deposition in the upper aerodigestive tract, a single institute experience. Ear Nose Throat J. 2023 doi: 10.1177/01455613231189144. PMID: 37515371. 11. Doan KD, Akinsanya A, Kuhar M, Mesa H. Fatal eosinophilic myocarditis and submassive hepatic necrosis in Lamotrigine induced DRESS syndrome. Allergy Asthma Clin Immunol. 2023 Oct 25;19(1):92. doi: 10.1186/s13223-023-00848-6. PMID: 37880699. 12. Youssef R, Maniar R, Khan J, Mesa, H. Metabolic Interplay in the Tumor Microenvironment: Implications for Immune Function and Anticancer Response. Curr. Issues Mol. Biol. 2023, 45, 9753-9767. PMID: 38132455. |
Manasa Reddy, MD
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Reddy MS, Alkashash A, Nord A, Tetrick A. Revisiting the benefits of isovolemic hemodilution red cell exchange for sickle cell disease. J Clin Apher. 2023 Oct;38(5):522-528. doi: 10.1002/jca.22054. Epub 2023 Apr 24. PubMed PMID: 37092306. |
Ryan Relich, PhD
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Relich RF, Loeffelholz MJ. 2023. Taxonomic changes for human viruses, 2020-2022. J Clin Microbiol. 18:30447022. doi: 10.1128/jcm.00337-22. PMID: 36541768. Gavina K, Franco L, Robinson C, Hymas W, Lei G-S, Sinclair W, Hall T, Carlquist J, Lavik JP, Emery C, Heaton P, Hillyard D, Lopansri B, Relich RF. 2023. Standardization of SARS-CoV-2 cycle threshold values – a multisite investigation evaluating viral quantitation across multiple commercial COVID-19 detection platforms. Microbiol Spectr. doi: https://journals.asm.org/doi/10.1128/spectrum.04470-22. PMID: 36651781. Gavina K, Whitacre B, Meyer T, Van Benten K, Glazier M, Emery C, Lavik JP, Relich RF. 2023. The Brief Case: Suspicious Gram-Negative coccobacilli – Francisella tularensis susp. novicida isolated from an immunocompromised patient with blastomycosis. J Clin Microbiol. doi: 10.1128/jcm.00787-22. PMID: 37338229. Chang-Graham AL, Sahoo MK, Huang CH, Solis D, Sibai M, August G, Calayag L, Kenji OM, Shi R-Z, Mostafa HH, Lei G-S, Relich RF, Pinsky BA. 2023. Comparison of nucleocapsid antigen with strand-specific reverse-transcription PCR for monitoring SARS-CoV-2 infection. J Clin Virol. 164:105468. doi: 10.1016/j.jcv.2023.105468. PMID: 37119583. Saunders JL, Daniels IA, Relich RF, Smith LA, Gaston BM, Davis MD. 2023. Effects of pH alteration on respiratory syncytial virus in human airway epithelial cells. ERJ Open Res. 9(4):00404-2022. doi: 10.1183/23120541.00404.-2022. PMID: 37465558. Gavina K, Franco LC, Khan H, Lavik JP, Relich RF. 2023. Molecular point-of-care devices for the diagnosis of infectious diseases in resource-limited settings – a review of the current landscape, technical challenges, and clinical impact. J Clin Virol. 169:105613. doi.10.1016/j.jcv.2023.105613. PMID: 37866094. |
George Sandusky, DVM, PhD, MS
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1. Abstract 5808: Integrin-linked kinase regulates Wnt transcriptional activity in platinum resistant ovarian cancer stem cells 6. Limited Approaches for Genomic Studies in Rapid Mortem Tissue Collection. George Sandusky, Michael Yard, Megan Szymanski, Lydia Emmert and Vivian Valadares. (2023). DOI: 10.5772/intechopen.1002715 14. TONSL Is an Immortalizing Oncogene and a Therapeutic Target in Breast Cancer. Khatpe, A. S., Dirks, R., Bhat-Nakshatri, P., Mang, H., Batic, K., Swiezy, S., Olson, J., Rao, X., Wang, Y., Tanaka, H., Liu, S., Wan, J., Chen, D., Liu, Y., Fang, F., Althouse, S., Hulsey, E., Granatir, M. M., Addison, R., Temm, C. J., George Sandusky, … Nakshatri, H. (2023). Cancer research, 83(8), 1345–1360. https://doi.org/10.1158/0008-5472.CAN-22-3667 |
Omer Saeed, MD
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1. Khan J, Ullah A, Yasinzai A, Waheed A, Ballur K, Dickerson T, Ullah K, Mejias C, Saeed O, Comparative survival benefits of surgery and adjuvant chemotherapy in neuroendocrine carcinoma of the gallbladder: a population-based study with insight into future personalized therapeutic approach. J Pers Med. 2023 Jun 18;13(6):1009. PMID: 37373998 2. Collins K, Yocum B, Mesa H, Cramer H, Saeed O, Comparison of endoscopic ultrasound-guided fine needle aspiration cytology versus endoscopic biopsy for the diagnosis of subepithelial lesions of the upper and lower gastrointestinal tract: a 10-year retrospective single institution analysis. Diagn Cytopathol. 2023 Apr 6. Online ahead of print. 37021663 3. Shacklette A, Chen S, DeWitt J, Patel K, Saeed O, Fine needle aspiration cytology of follicular dendritic cell sarcoma of the stomach masquerading as gastrointestinal stromal tumor: a case report of a unique entity with emphasis on cytomorphology. Diagn Cytopathol. 2023 Mar 31. Online ahead of print. 4. Ullah A, Saeed O, Karki N, Goodbee M, Yasinzai A, Waheed A, Heneidi S, Thomas A, Karim N, Johnson J, Rivero J, Khan J, Clinicopathological and Treatment Patterns of Combined Small-Cell Lung Carcinoma with Future Insight to Treatment: A Population-Based Study. J. Clin. Med. 2023, 12(3), 991. PMID: 36769639 |
Sheila Segura, MD
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1. Warmke, LM, Mustafa, A, Zou, YS, Davis, JL, Ulbright, TM, Segura, SE. Myxoid epithelioid smooth muscle tumor of the vulva: A distinct entity with MEF2D::NCOA2 gene fusion. Genes Chromosomes Cancer. 2023; 1-6. doi:10.1002/gcc.23209 2. O'Cearbhaill RE, Miller A, Soslow RA, Lankes HA, DeLair D, Segura S, Chavan S, Zamarin D, DeBernardo R, Moore K, Moroney J, Shahin M, Thaker PH, Wahner-Hendrickson AE, Aghajanian, C. A phase 2 study of dasatinib in recurrent clear cell carcinoma of the ovary, fallopian tube, peritoneum or endometrium: NRG oncology/gynecologic oncology group study 0283, Gynecologic Oncology,Volume 176, 2023, Pages 16-24, ISSN 0090-8258, https://doi.org/10.1016/j.ygyno.2023.06.021. 3. Ullah A, Khan J, Yasinzai AQK, Tracy K, Nguyen T, Tareen B, Garcia AA, Heneidi S, Segura SE. Metaplastic Breast Carcinoma in U.S. Population: Racial Disparities, Survival Benefit of Adjuvant Chemoradiation and Future Personalized Treatment with Genomic Landscape. Cancers. 2023; 15(11):2954. PMID: 37296916 |
Thomas Ulbright, MD
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1. Collins K, Sholl LM, Siegmund S, Dickson BC, Colecchia M, Michalová K, Hwang M, Ulbright TM, Kao CS, van Leenders G, Mehta V, Trpkov K, Yilmaz A, Cimadamore A, Matoso A, Epstein JI, Maclean F, Comperat E, Anderson WJ, Fletcher CDM, Acosta AM: Myoid gonadal stromal tumours are characterised by recurrent chromosome-level copy number gains: molecular assessment of a multi-institutional series. Histopathology. 2023;82:431-438. PMID 36226695 2. Collins K, Sholl LM, Vargas SO, Cornejo KM, Kravstov O, Dickson BC, Idrees MT, Ulbright TM, Acosta AM: Testicular juvenile granulosa cell tumors demonstrate recurrent loss of chromosome 10 and absence of molecular alterations described in ovarian counterparts. Mod Pathol 2023, 36:100142. PMID 36813116 3. Acosta AM, Bridge JA, Dal Cin PS, Sholl LM, Cornejo KM, Fletcher CDM, Ulbright TM: Inflammatory and nested testicular sex cord tumor: a novel neoplasm with aggressive clinical behavior and frequent EWSR1::ATF1 gene fusions. Am J Surg Pathol 2023;47:504-517. PMID 36791251 4. Erak E, Ulbright TM, Epstein J: Utilization of NKX3.1, P501S, prostate-specific antigen, and steroidogenic factor 1 to distinguish malignant Leydig cell tumor from mtastatic prostatic adenocarcinoma to the testis. Arch Pathol Lab Med 2023.PMID 36881770 5. Nova-Camacho LM, Collins K, Trpkov K, Acosta AM, Sangoi AR, Akgul M, Chou A, Polonia A, Rodrigues Â, Yilmaz A, Perez-Montiel D, Maclean F, Queipo Gutiérrez FJ, Contreras F, Wu HH, Alvarado-Cabrero I, de Torres I, Ruiz I, Lobo J, Prendeville S, Manrique Celada M, Cheng L, Galea LA, Hwang M, Aron M, García-Martos M, Zalles N, Raspollini MR, Williamson SR, Ulbright TM, Panizo A: Metastatic solid tumours to the penis: a clinicopathologic evaluation of 109 cases from an international collaboration. Histopathology 2023. PMID 37071396 6. Yu S, Sholl LM, Siegmund S, Ulbright TM, Collins K, Colecchia M, Del Pilar Gonzalez-Peramato M, Michalová K, Gordetsky JB, Cornejo KM, Kao CS, Wobker SE, Vargas SO, Maclean F, Idrees MT, Anderson WJ, Fletcher CDM, Acosta AM: Large cell calcifying Sertoli cell tumour: molecular and immunohistochemical assessment of a series comprising non-metastasising and metastasising neoplasms. Histopathology 2023. PMID 36929593 7. Nova-Camacho LM, Acosta AM, Trpkov K, Sangoi AR, Pierre A, Chou A, Yilmaz A, Morini A, Rodrigues Â, Fletcher CDM, Perez-Montiel D, Maclean F, Contreras F, Queipo FJ, Muñiz Unamunzaga G, Mesa H, de Torres I, Ruiz I, Alvarado-Cabrero I, Lobo J, Schwartz L, Cheng L, Akgul M, García-Martos M, Palmer MB, Aron M, Raspollini MR, Manrique Celada M, Hwang M, Idrees MT, Rioux-Leclercq N, Zalles N, Vergara N, Lal P, Wobker S, Kammerer-Jacquet SF, Prendeville S, Tilmant T, Ulbright TM, Verkarre V, Collins K, Williamson SR, Panizo A. Metastatic solid tumors to the testis: a clinicopathologic evaluation of 157 cases from an international collaboration. Hum Pathol 2023;139:37-46.PMID 37331529 8. Collins K, Ulbright TM, Davis JL. Anterior mediastinal neuroblastoma in an adult: an additional case of a rare tumor in an unusual location with review of the literature. Diagn Pathol 2023;18:127. PMID 38031161 9 Warmke LM, Perret R, Ledoux P, Michot A, Italiano A, Zou YS, Matoso A, Argani P, Ulbright TM, Baumhoer D, Ameline B, Gross JM. EWSR1::WT1 fusions in neoplasms other than conventional desmoplastic small round cell tumor: three tumors occurring outside the female genital tract. Mod Pathol 2023:100418 [Epub ahead of print]. PMID 37870842 10. Ricci C, Ambrosi F, Grillini A, Massari F, Fiorentino M, Colecchia M, Ulbright TM, Acosta AM. Analysis of GATA3 and FOXA2 expression suggests that downregulation of genes involved in the maintenance of a mature yolk sac tumor phenotype may underlie sarcomatoid transformation. Virchows Arch 2023 [Epub ahead of print]. PMID 38141134 11. Collins K, Kocemba J, Saad M, Acosta AM, Ulbright TM, Argani P, Williamson SR. Smooth muscle and adenoma-like renal tumour (SMART): another example suggesting distinction from mixed epithelial and stromal tumour. Histopathology 2023 (Epub ahead of print]. PMID 38114288 12. Acosta AM, Sholl LM, Maclean F, Kao CS, Ulbright TM. Testicular neoplasms with sex cord and stromal components harbor a recurrent pattern of chromosomal gains. Mod Pathol 2023;37:100368 [Epub ahead of print]. PMID 37871653 13. Acosta AM, Idrees MT, Collins K, Masterson T, Ulbright TM. Primary Mullerian-type clear cell carcinoma of the seminal vesicle presenting as a testicular mass. Histopathology 2023 [Epub ahead of print]. PMID 37644652 14. Abdulfatah E, Al-Obaidy KI, Robinson D, Wu YM, Heider A, Idrees MT, Ulbright TM, Kunju LP, Wu A. Molecular characterization of large cell calcifying Sertoli cell tumors: A multi-institutional study of 6 benign and 2 malignant tumors. Hum Pathol 2023 [Epub ahead of print]. PMID 38154678 |
Brandon Umphress, MD, MS
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Umphress B, Kuhar M, Kowal R, Alomari AK, Baldridge LA, Ross AJ, Warren SJ. NTRK expression is common in xanthogranuloma and is associated with the solitary variant. J Cutan Pathol. 2023 Nov;50(11):991-1000. doi: 10.1111/cup.14510. Epub 2023 Aug 14. PMID: 37580954. |
Laura Warmke, MD
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1. Warmke LM, Wang WL, Baumhoer D, et al. TAF15::NR4A3 gene fusion identifies a morphologically distinct subset of extraskeletal myxoid chondrosarcoma mimicking myoepithelial tumors. Genes Chromosomes Cancer. 2023 Oct;62(10):581-588. doi: 10.1002/gcc.23144. Epub 2023 Apr 14. PMID: 37057757. 2. Warmke LM, Al-Ibraheemi A, Wang L, et al. FGFR1 gene fusions in a subset of pediatric mesenchymal tumors: Expanding the genetic spectrum of tumors sharing histologic overlap with infantile fibrosarcoma and "NTRK-rearranged" spindle cell neoplasms. Genes Chromosomes Cancer. 2023 Nov;62(11):641-647. doi: 10.1002/gcc.23179. Epub 2023 Jun 2. PMID: 37265193. 3. Warmke LM, Collier CD, Davis JL. NR1D1::MAML1 epithelioid and spindle cell sarcoma mimicking pseudomyogenic hemangioendothelioma in core biopsy: A case report and review of the literature. Genes Chromosomes Cancer. 2023 Nov;62(11):655-662. doi: 10.1002/gcc.23186. Epub 2023 Jun 16. PMID: 37326138. 5. Kumar R, Warmke LM, Wang WL. Ewing sarcoma of Hoffa fat pad in the knee: a case report and review of the literature on primary intraarticular sarcomas and Hoffa fat pad masses. Skeletal Radiol. 2023 Jul;52(7):1415-1420. doi: 10.1007/s00256-022-04239-7. Epub 2022 Dec 9. PMID: 36484842. 6. Warmke LM, Yu W, Meis JM. Sclerosing epithelioid sarcoma. Surgical Pathology Clinics. doi: 10.1016/j.path.2023.06.009. Epub 2023 Aug 5. In Press. 7. Warmke LM, Michal M, Martínek P, et al. "PRRX1-rearranged mesenchymal tumors": expanding the immunohistochemical profile and molecular spectrum of a recently described entity with the proposed revision of nomenclature. Virchows Arch. 2023 Aug;483(2):207-214. doi: 10.1007/s00428-023-03575-w. Epub 2023 Jun 20. PMID: 37338620. 8. Warmke LM, Mustafa A, Zou YS, Davis JL, Ulbright TM, Segura SE. Myxoid epithelioid smooth muscle tumor of the vulva: A distinct entity with MEF2D::NCOA2 gene fusion. Genes Chromosomes Cancer. 2024 Jan;63(1):e23209. doi: 10.1002/gcc.23209. Epub 2023 Oct 23. PMID: 37870842. 9. Dehner CA, Torres-Mora J, Gupta S, Kipp BR, Halling KC, Chen S, Warmke LM, Michal M, Alani A, Yu W, Kovacs K, Obeidin F, Iwenofu OH, Satturwar S, Meis JM, Folpe AL. Sarcomas Harboring EWSR1::PATZ1 Fusions: A Clinicopathologic Study of 17 Cases. Mod Pathol. 2023 Dec 1;37(2):100400. doi: 10.1016/j.modpat.2023.100400. Epub ahead of print. PMID: 38043789. 10. Warmke LM, Perret R, Ledoux P, et al. EWSR1::WT1 fusions in neoplasms other than conventional desmoplastic small round cell tumor: three tumors occurring outside the female genital tract. Mod Pathol. 2023 Dec 27:100418. doi: 10.1016/j.modpat.2023.100418. Epub ahead of print. PMID: 38158126. |
Simon Warren, MD
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1. Czaja R, Layng KV, Barrett A, Hooper P, Alomari A, Warren S. An NTRK-1 associated soft tissue tumor showing distinctive nodules with peripheral accentuation of cellularity. J Cutan Pathol. 2023 50(4):343-348. PMID: 36335562 2. Alomari, AA, Harms PW, Andrea AA, Warren SJ. MAP2K1 in-Frame Deletion Melanocytomas Have Reproducible Histopathologic Features and Share Similarities with Melanocytic Tumors in Intermittently Sun-Exposed Skin . J Cutan Pathol. 2023 Aug 11. doi: 10.1111/cup.14502. PMID: 37565534. 3. Umphress B, Kuhar M, Kowal R, Alomari AK, Baldridge LA, Ross AJ , Warren SJ. NTRK expression is common in xanthogranuloma and is associated with the solitary variant J Cut Pathol 2023 Aug 15 DOI: 10.1111/cup.14510. 4. Warren SJ, Alomari AK. Utility of sequencing for ATP6AP1 and ATP6AP2 to distinguish between atypical granular cell tumor with junctional component and melanoma. J Cutan Pathol. 2023 Aug 11. doi: 10.1111/cup.14503. Epub ahead of print. PMID: 37565535 |
Cong Yan, PhD
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1. Lam, P., Ashbrook, A., Zygmunt. D. A., Yan, C., Du, H., Martin, P. T. (2022) Therapeutic Efficacy of rscAAVrh74.miniCMV.LIPA Gene Therapy in a Mouse Model of Lysosomal Acid Lipase Deficiency. Molecular Therapy - Methods & Clinical Development. DOI: 10.1016/j.omtm.2022.08.001 2. Zhao, T., Liu, S., Ding, X., Johnson, E. M., Hanna, N. H., Singh, K., Chandan K Sen, C. K., Wan, J., Du, H. and Yan, C. (2022) Lysosomal acid lipase, CSF1R and PD-L1 determine functions of CD11c+ myeloid-derived suppressor cells. JCI Insight 2022;7(17):e156623. https://doi.org/10.1172/jci.insight.156623. 3. Zhao, T., Liu, S., Hanna, N.H., Jalal, S., Ding, X., Wan, J., Yan, C. and Du, H. (2023) LAL Deficiency Induced Myeloid-Derived Suppressor Cells as Targets and Biomarkers for Lung Cancer. Journal for ImmunoTherapy of Cancer 2023;0:e006272. doi:10.1136/jitc-2022-006272. 4. Zhao, T., Du, H. and Yan, C. (2023) Characterization of lysosomal acid lipase in Ly6G+ and CD11c+ myeloid-derived suppressor cells. Methods in Cell Biology (Book series), DOI: 10.1016/bs.mcb.2023.05.011. |
Dongwei Zhang, MD, PhD
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1. Hou T, Abu-Salah A, Cummings OW, Halum S, Mesa H, Zhang D. Amyloid Deposition in the Upper Aerodigestive Tract, A Single Institute Experience. Ear, Nose & Throat Journal. First published online July 28, 2023. https://doi.org/10.25384/SAGE.c.6766214.v1 2. Liao X, Oltvai ZN, Zhang D*. Synchronous Triple Thyroid Neoplasms With Unique Molecular Alterations: A Rare Case Report. Human Pathology Reports. 2023;33:300709. https://doi.org/10.1016/j.hpr.2023.300709 3. Rex DK, Lahr RE, Guardiola JJ, Dewitt JM, Zhang D*. Characterization of endoscopic features and histology of a distinct mucosal transition zone on the ileocecal valve. Gastrointest Endosc. 2023 Mar 31;S0016-5107(23)00361-9. PMID: 37004817. 4. Liao X, Lai J, Lin J, Zhang D*. Primary and Secondary Angiosarcomas of the Liver: A Multi-institutional Study of 32 Cases. Human pathology. 2023;137:10-17. PMID: 37054784 5. Liu X, Zhang D, Liao X. Paget cells of the esophagus: A clinicopathologic and immunohistochemical study of 10 cases. Pathology - Research and Practice. 2023 Jan 24;242:154345. PMID: 36708601 6. Lahr RE, DeWitt JM, Zhang D, Rex DK. Assessment of Submucosal Distortion and Mass Effect Seen at Follow-up After Colorectal Endoscopic Mucosal Resection with ORISE. Gastrointestinal Endoscopy. 2022 Oct;96(4):679-682. PMID: 35550794. 7. Liao X, Zhang D*, Groove pancreatitis due to periampullary gangliocytic paraganglioma with lymph node metastasis. Pathology. 2022 Oct 7;S0031-3025(22)00268-9. PMID: 36328810 8. Weldemichael W, Zhang D, Lin J. Histopathological Evaluation of Recurrent Primary Biliary Cholangitis after Liver Transplantation. Journal of Clinical and Translational Pathology. 2022; 2(3):91-99. doi: 10.14218/JCTP.2022.00021 9. Chen IY, Giampoli E, Zhang D*. Ameloblastic Carcinoma of the Maxilla: A Rare Case Report and Review of Literature from 1948 to 2021. International Journal of Surgical Pathology. 2022 Jun 6; 10668969221102542. PMID: 35668625 10. Zhang D, Liao X. Pan-TRK Protein Expression and NTRK Gene Fusions in Primary Carcinomas of the Liver. Applied Immunohistochemistry & Molecular Morphology. 2022 Jul 1;30(6):435-440. PMID: 35587529 11. Mahdi Z, Zhang D, Gonzalez RS. Accuracy of Risk-Stratifying Gastrointestinal Stromal Tumours Using Information Available During Biopsy. Histopathology. 2022 Jul;81(1):137-141. PMID: 35347745 12. Zhang D, Love T, Hao Y, Liu J, Thung S, Fiel M, Whitney-Miller C, Liao X. Tumor Size, Not Small Vessel Invasion Predicts Survival in Patients With Hepatocellular Carcinoma. American Journal of Clinical Pathology. 2022 Feb 10;aqac001. PMID: 35142813 13. Liao X, Zhang D*. HHLA2 immune checkpoint is a novel prognostic predictor in hepatocellular carcinoma. American Journal of Clinical Pathology. 2022 Jan 27;aqab221. PMID: 35084443 14. Gonzalez IA, Fuller LD, Zhang X, Papke Jr DJ, Zhao L, Zhang D, Liao X, Liu X, Fiel MI, Zhang X. Development of a novel scoring system to differentiate amiodarone-induced liver injury from alcoholic steatohepatitis. American Journal of Clinical Pathology. 2022;157:434-442. PMID: 34596220 |